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HOW DO I VIEW A DICOMDIR FILE REGISTRATION
when an alternative subject id was entered in the įield during subject registration at the scanner console (i.e. Mapper-file and, optionally, uses the dicom values to rename the sub-/ses-id's of the subfolders. Maps out the values of a dicom attribute of all subjects in the sourcefolder, saves the result in a dcmĭicomsort /project/3022026.01/raw/DICOMDIR -subprefix sub-sesprefix ses. For instance, if a functional fmri protocol is named “StopTask” or “fMRI_Stroop”, the default bidsmap_dccn template will yield a positive ‘func/bold’ match, as it has the “task” and “fMRI” keywords in it’s run-item regular expression.
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Typically, in the DCCN users name their MR scan protocols in a meaningful way, which is therefore used as a basis for intelligent source datatype identification. Recommended data acquisition conventions ¶īIDScoin can automatically recognize source datatypes on the basis of it’s properties and attributes. DICOMDIRs are often used in clinical settings and may look like: A DICOMDIR is dictionary-file that indicates the various places where the DICOM files are stored. The data folder contains a DICOMDIR file and multiple subfolders. It is also worth stating that the "sorting" provided by this class is, in fact, unnecessary: the vtkDICOMReader itself is capable of sorting its input files into the correct order.| | | |- 00001_14582956872274162.IMA The vtkDICOMFileSorter class is obsolete, since its capabilities are eclipsed by the vtkDICOMDirectory class, but its use is documented here for historical reasons. It is recommended to use utf-8 as the character set for the query, regardless of the character set used in the DICOM files. This does not have to be the same as the character set used in the files you are searching for. If the query contains any non-ASCII text, you must set the SpecificCharacterSet attribute to whichever character set your program uses internally.
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The query PRIMARY will match the multi-valued attribute value ORIGINAL\PRIMARY, since only one value has to match.
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Matching of all text is done by first converting the text to utf-8 for compatibility, and for patient names the matching is case insensitive. For dates, you can use a hyphen to specify a range of dates. These directories are searched recursively for all files that match the query.Īll text attributes except for dates accept the wildcards '*' and '?'. This is similar in purpose to querying a PACS system, except that you are instead providing one or more disk directories where the files might exist. It can search for files that have certain attributes, for example it can search a filesystem for all scans of a specific patient. The vtkDICOMDirectory class has another trick up its sleeve. Furthermore, the method GetMetaDataForSeries() returns an amalgamation of the Patient, Study, Series, and Image information as a vtkDICOMMetaData object (though the per-image information is sometimes limited to just the InstanceNumber and the SOPInstanceUID). Usually the StudyDescription, SeriesDescription and SeriesNumber are also available. At the bare minimum, these will provide the PatientName, PatientID, StudyDate, StudyTime, StudyInstanceUID, and SeriesInstanceUID. The PatientRecord, StudyRecord, and SeriesRecord in the above example contain attributes for the images that were stored in the DICOMDIR index file.